can you write a post about how to easily generate circos plots. I found it very difficult to write code to generate circos plots to visualize CNVs, gene fusions from standard output like dragen
Good suggestion. I'm in the minority here but I'm really not a fan of Circos plots. In rare cases they can be useful but almost universally I find that a different visualization is usually better. Difficulty lies in interpreting the height of the "Y-axis" on a circos plot in different positions around the radius.
can you write a post about how to easily generate circos plots. I found it very difficult to write code to generate circos plots to visualize CNVs, gene fusions from standard output like dragen
Good suggestion. I'm in the minority here but I'm really not a fan of Circos plots. In rare cases they can be useful but almost universally I find that a different visualization is usually better. Difficulty lies in interpreting the height of the "Y-axis" on a circos plot in different positions around the radius.
yes, for specific case. I want to illustrate the shear amount of event's associated with specific cancers and the circos plots seems to be the best